Software
MATLAB code for Multidimensional Diffusion MRI
This package contains MATLAB files to help researchers analyze multi-dimensional diffusion MRI data, for example, data acquired withb-tensors of varying shape.
https://github.com/markus-nilsson/md-dmri
MRI simulator in MATLAB
A simple MRI simulator for visualization of various concepts
https://github.com/markus-nilsson/mri-simulator
The MR IDL library
The MR IDL-library is a library of IDL classes to facilitate data display and handling, aimed to fulfill the requirements in a physical/medical research environment.
Included are e.g. classes for image display, plugin classes to facilitate user interaction (zooming, panning, ROI definition, etc.) and classes for handling and I/O of image sets. The latter support writing of images in DICOM3.0 format.
Please see the link below, containing overview, code examples and downloads.
LUPE - the Lund Perfusion Program
A modular software for calculation of brain perfusion parametric maps from dynamic susceptibility contrast perfusion weighted MR images, presented at the 21st annual meeting of the ESMRMB September 9-12 in Copenhagen. Source code and a runtime version (.sav file) are published here under the terms of the GPL. See the overview for more info.
